One of the few things that set fractals and raids (and with raids, strike missions) apart from one another is the fact that you are able to prestack boons and that way be sure that you will have enough boons for a set amount of time. This allows for some nifty strategies (such as swapping boon duration gear for damage gear) that, in my humble opinion, make the fractals so interesting. This is due to the fact that you can do multiple small adjustments to the build or the gear that you are using with the prestacked boons to be able to take your gameplay to another level. This can shave off A LOT OF time when it comes to fractal CM bosses (as well as other encounters) and makes it much more fun to upkeep boons for a set amount of time.
Please change the Sunqua Peak fractal to not strip the boons in the beginning, if there is no actual reason for it to do that, so it follows the "unwritten rules" of fractals.